Seasons & episodes

Ms. Mari takes Lan and Maylu to an International Exhibition being held at the amazing new Sea Tower building that rises up from the middle of the harbor, but their visit is interruped when ever-ready Net rival Tamako appears and goads Lan into a NetBattle. But soon there's another interruption: SavageMan shows up, sent by the Mysterious Man to take care of MegaMan and Lan in exchange for the DarkChips he craves. The forces of evil aren't messing around this time: they've even sent in Ms. Yuri to destroy the Sea Tower with our heroes inside!

Lan shows up to save a stalled truck on the train tracks, but he finds that a stranger already took care of the situation. Later, Lan meets the stranger, Raika, a NetSaver from Sharo, and his NetNavi, SearchMan, who had helped MegaMan and Lan defeat ShadowMan earlier. Raika is unimpressed by Lan, feeling he relies too much on the SynchroChip and not enough on his intelligence. And when VideoMan attacks, it seems that Raika is right: CrossFusion MegaMan can't defeat VideoMan, but luckily Raika destroys the Dimensional Area generator and gets rid of VideoMan before he can delete CrossFusion MegaMan.

Raika and Lan are instructed to work together to investigate what's apparently a ghost that's robbing banks and corporations. Unable to get along with each other, they decide to work independently. When the ringleader behind the thefts turns out to be DesertMan (who can make himself invisible), MegaMan finds himself in big trouble and facing a tough NetBattle all alone. Meanwhile SearchMan, against Raika's orders, goes in to rescue MegaMan. Raika is shocked that SearchMan has disobeyed his orders. MegaMan gains a new DoubleSoul power, Search Soul, and with it, he defeats DesertMan.

After using the DarkChips too many times, the Darkloids begin to depend on them just to function, so DesertMan breaks into NetPolice headquarters to steal some confiscated DarkChips. Lan and MegaMan rush into action and manage to stop the sandy scoundrel and capture him. Dr. Hikari examines DesertMan and tells the others that he thinks Darkloids might actually be a new digital creation that evolved on its own--unlike every other Navi, which were at least partly created by humans. ShadeMan learns of DesertMan's capture and sends FlashMan to free him, but ShadeMan realizes that FlashMan might need a little help. With the Mysterious Man's assistance, ShadeMan captures Keifer and Manuela and offers to return them in exchange for DesertMan's release.

ShadeMan, who's suspicious of the Mysterious Man, schemes to obtain the DarkChips on his own. Soon after, information on the DarkChips is leaked to Manuela, but when she investigates, she's blocked by a Dimensional Area that surrounds the Secret Warehouse Lab. CrossFusion MegaMan and CrossFusion ProtoMan break through the Dimensional Area's barrier, but they find their way to the chips is blocked by the fearsome GravityMan. Working together, our heroes defeat GravityMan, but they discover, as does ShadeMan, that getting a hold of the elusive DarkChips is much more difficult than they thought.

BubbleMan is convinced that he has the answer to defeating MegaMan: DoubleSoul. The only thing is, true friendship is the basis of DoubleSoul, and BubbleMan has no friends. None of the Darkloids are willing to work with him, so he goes off in search of a Navi that he can trick into becoming his friend. Only he has it all wrong, and thinks that in order to make friends he needs to take data from them. BubbleMan finds SpoutMan and IceMan, and convinces them both to hang out with him, a first step to getting them to give him their allegiance. When MegaMan and the other encounter the odd trio, BubbleMan tricks SpoutMan and IceMan into battling their own friends!

Having gotten a hold of the Darkloids' Dimensional Area generator, SciLab has brought in Dr. Regal to investigate its mysterious energy source. Dr. Regal finds a way to power up the generator, but then a Darkloid named SparkMan shows up and uses the energy of the generator to drain the strength from CrossFusion MegaMan and CrossFusion ProtoMan during a battle! SparkMan succeeds with his mission to destroy the generator, and the secret of its power source comes out--it runs on data from captured NetNavis.

BubbleMan becomes a pawn in the power struggle between ShadeMan and the Mysterious Man. Meanwhile, the Mysterious Man sends BurnerMan on a mission to cause a devastating volcanic eruption. The site happens to be right under the hot springs Lan and the gang have gone to for vacation. As the tiny town begins heating up and melting down, Chaud joins Lan to stop BurnerMan from superheating the magma deep below the earth and causing massive molten mayhem. But can the NetSavers stop their fiery foe in time?

VideoMan tricks MegaMan into coming to a video store and then records his movements and copies his image. VideoMan then transfers MegaMan's likeness to videotapes around the world so that every time someone watches one, the MegaMan copy appears and causes trouble. Lan and Chaud finally figure out how to erase the tapes using a magnetic field, and as CrossFusion MegaMan and CrossFusion ProtoMan, they erase all the MegaMan copies and delete VideoMan as well.

A girl named Anetta lost her NetNavi in the past, and she's lead to believe that Chaud's ProtoMan was the one who deleted her. She works with Ms. Yuri and the Darkloids to try and infect ProtoMan with a DarkChip, but will she succeed?

Lan and Chaud travel to Nebula's base where Anetta is being held hostage. Once there, however, ShadeMan materializes in the real world and they battle with him using Cross Fusion. The ship in which the base is being held on is going to explode, so Lan and Chaud need to evacuate... but in the cyber world, ShadeMan is fighting with MegaMan and ProtoMan. Chaud is tempted with a DarkChip to rescue ProtoMan from deletion, but will he use it?

MegaMan tries to offer comfort to Chaud, who has just lost his NetNavi ProtoMan. Meanwhile, Lan is asked to stand guard at a fashion show that shows off special new holographic technology. Maylu is also there, but things turn for the worse when Yuri tries to steal the technology. SparkMan appears to help her with her mission, but Chaud also arrives to stop Yuri himself.

Chaud is having trouble dealing with the loss of ProtoMan to darkness, but Lan helps comfort him with his loss. Later, when GravityMan and ProtoMan attack, Chaud is forced to fight against his own NetNavi to protect important NetSaver data while Lan handles GravityMan.

When MegaMan rescues SpoutMan from a Darkloid attack, SpoutMan begins idolizing his new hero and following him everywhere, causing Roll to grow jealous. Meanwhile, BurnerMan attacks, and MegaMan must fight, but SpoutMan and Roll get in the way. In the end, BurnerMan is deleted when MegaMan uses SpoutSoul against the Darkloid.

Yai needs her friends' help again. An AyanoTech satellite has been covered in space debris, so Lan and co. board a space station built from junk to solve the problem. In the station's network, MegaMan meets JunkDataMan, the NetNavi responsible for the mess, and a misunderstanding leads to a battle between the two.

The NetAgents have returned to DenTech City, and Lan is shocked to learn that everyone already knew their identities were Sal, Miyu, and Maysa. Mr. Gauss also returns to town to make a deal with Ms. Yuri, but mistakening Ms. Mari for her, he holds her hostage. Commander Beef dashes to rescue his love from danger.

Lan meets Misaki, the first person to test CrossFusion. Misaki uses his NetNavi PrismMan to help in the capture of GravityMan. However, Misaki is overcome with his desire to CrossFuse, and Ms. Yuri uses his desires to lure him toward a trap. Meanwhile, Chaud assists Lan with the Battle Chip Gate to delete GravityMan using the Program Advance.

Misaki uses the power of a Dark SynchroChip to CrossFuse, but as a side-effect, his human heart is enriched with darkness. Captured by the NetSavers, they begin to heal him, but Ms. Yuri reinstitutes his darkness, causing him to escape. Lan battles with Misaki in CrossFusion, but the battle causes Lan's PET to be badly damaged.

Lan must use his own body in order to help rebuild MegaMan after his PET is damaged beyond repair. Meanwhile, Nebula sends NovaMan, BrightMan, SwordMan, and FridgeMan to attack various locations. In Lan's absence, Raika works with old friend Raoul to stop the invasion. BrightMan is deleted, and the others retreat.

Dr. Hikari finishes Lan's new PET, the PET II, which amplifies CrossFusion abilities, but the installation isn't completed. However, Dark ProtoMan infiltrates the Sci-Labs to destroy the PET (with MegaMan inside). Anetta takes the PET and Dark ProtoMan gives chase with Chaud close behind to rescue her. Chaud and Anetta work together to capture Dark ProtoMan, but NovaMan appears to finish the job. The installation in PET II is finally completed. Lan appears and, using the PET II, easily deletes NovaMan.

Lan becomes arrogant with his new PET II's powers, so Chaud and Raoul pose as afro wig-wearing villains to teach Lan a lesson. However, SwordMan appears to cause problems, and he overcomes ThunderMan in battle. MegaMan uses ThunderSoul to stop SwordMan.

Lan and his friends' NetNavis disappear in a tornado of wind, and they track them to Shiisaa Island. There, they meet Lily and her NetNavi WindBlastMan. Ms. Yuri also appears on the island, hoping to steal the data within an ancient relic. When SpikeMan disrupts the relic, a huge storm brews over the island, and using WindSoul MegaMan defeats Spikeman.

Lan and Chisao are leaving a theme park on a train when SparkMan attacks the train's network. Sal has been tailing the NetNavi and sends WoodMan in to help with MegaMan. In order to delete SparkMan, MegaMan and WoodMan combine their powers to create WoodSoul.

A Dimensional Area has appeared over a factory in Sharo, so Raika calls for Lan to help infiltrate it against his general's orders. Inside, they meet FridgeMan who is trying to steal minerals. Upon his defeat, Lan learns that Raika was mostly trying to rescue his pet dog that was trapped in the factory.